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VPE1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VPE1" - Vacuolar processing enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPE1Vacuolar processing enzyme (661 aa)    
Predicted Functional Partners:
GPIT1
Glycosyl phosphatidyl inositol transamidase subunit (774 aa)
     
  0.939
EDP00598
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (257 aa)
     
   
  0.819
EDO97961
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (129 aa)
     
   
  0.819
LRG5
Predicted protein (681 aa)
     
  0.818
EDP09822
6-phosphogluconolactonase-like protein (258 aa)
           
  0.806
ERV1
Sulfhydryl oxidase (140 aa)
           
  0.608
STA11
4-alpha-glucanotransferase (584 aa)
           
  0.574
EDP09057
Esterase (298 aa)
     
   
  0.493
CEP1
Cysteine endopeptidase (469 aa)
     
   
  0.464
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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