STRINGSTRING
EDO96539 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96539" - Ankyrin-repeat protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96539Ankyrin-repeat protein (749 aa)    
Predicted Functional Partners:
EDO97273
Predicted protein (748 aa)
     
        0.680
EDP02246
Predicted protein (1150 aa)
     
        0.664
EDO98924
Predicted protein (622 aa)
     
        0.651
EDP00842
Predicted protein (463 aa)
     
        0.640
PTN1
PTEN PI-3 phosphatase (647 aa)
     
        0.601
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
        0.572
EDP05711
Predicted protein (1010 aa)
     
        0.565
EDO96254
Predicted protein (820 aa)
     
        0.562
EDP04430
Predicted protein (123 aa)
     
        0.557
USE1
Qc-SNARE protein, USE1 family (482 aa)
     
        0.554
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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