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GGPS protein (Chlamydomonas reinhardtii) - STRING interaction network
"GGPS" - Geranylgeranyl diphosphate synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGPSGeranylgeranyl diphosphate synthase (345 aa)    
Predicted Functional Partners:
IDI1
Isopentenyl-diphosphate delta-isomerase (307 aa)
 
 
  0.987
PSY
Phytoene synthase (382 aa)
   
  0.967
EDP09986
Geranylgeranyl reductase (504 aa)
   
  0.967
IDS1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (465 aa)
   
 
  0.963
EDP08276
Predicted protein (229 aa)
   
  0.958
EDO99033
Predicted protein (503 aa)
       
  0.952
FPPS
Farnesyl diphosphate synthase (360 aa)
         
  0.939
EDP09664
Predicted protein (321 aa)
     
 
  0.933
EDP08684
Solanesyl diphosphate synthase (394 aa)
   
 
0.929
EDP05515
Geranyl diphosphate synthase (410 aa)
   
   
0.924
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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