STRINGSTRING
EDO96685 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96685" - Global transcription factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96685Global transcription factor (1054 aa)    
Predicted Functional Partners:
EDP09315
High mobility group protein (552 aa)
     
  0.998
EDP03315
Paf1 complex component (656 aa)
     
  0.983
EDP00621
Paf1 complex component (502 aa)
     
  0.982
EDO98741
Paf1 complex component (106 aa)
     
  0.982
EDP04357
Paf1 complex component (973 aa)
     
  0.982
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.970
EDP09659
Casein kinase 2 beta chain, CK2B; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (204 aa)
     
  0.969
EDP07463
Paf1 complex component (396 aa)
     
  0.948
EDP09581
Predicted protein (68 aa)
     
  0.933
EDP02936
Predicted protein (365 aa)
     
  0.933
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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