STRINGSTRING
EDO96710 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96710" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96710Predicted protein (760 aa)    
Predicted Functional Partners:
EDP08753
Predicted protein (279 aa)
     
  0.874
RAD50
DNA repair protein (1410 aa)
     
  0.866
EDP08752
Predicted protein (366 aa)
     
  0.863
EDP08751
Predicted protein (461 aa)
     
  0.846
PAP1
Poly(a) polymerase (407 aa)
     
  0.846
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.840
EDP05271
RNA processing protein (511 aa)
     
  0.832
DNL4
DNA ligase IV (831 aa)
   
  0.831
SSA7
Predicted protein (765 aa)
     
  0.829
EDO98953
DNA binding protein (661 aa)
     
  0.800
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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