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XAB2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"XAB2" - Transcription-coupled DNA repair protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XAB2Transcription-coupled DNA repair protein (886 aa)    
Predicted Functional Partners:
EDP09592
Predicted protein (698 aa)
     
0.998
EDP09390
GCIP domain protein (151 aa)
     
  0.997
EDP03322
Predicted protein (811 aa)
     
  0.996
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.996
EDP07967
Predicted protein (343 aa)
     
  0.995
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
  0.994
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.993
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.993
EDP06331
Predicted protein (276 aa)
     
  0.993
EDP09509
Predicted protein (494 aa)
     
  0.991
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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