STRINGSTRING
SUFD protein (Chlamydomonas reinhardtii) - STRING interaction network
"SUFD" - Iron-sulfur cluster assembly protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUFDIron-sulfur cluster assembly protein (482 aa)    
Predicted Functional Partners:
SUFC
Iron-sulfur cluster assembly protein (284 aa)
 
  0.998
SUFE
Cysteine desulfuration protein (216 aa)
 
 
  0.943
SUFB
Iron-sulfur cluster assembly protein (511 aa)
   
   
  0.924
SUFA
Iron-sulfur cluster assembly protein (162 aa)
   
 
  0.898
SUFS1
Cysteine desulfurase (430 aa)
 
  0.896
SUFS2
Cysteine desulfurase (406 aa)
 
  0.876
EDO98384
Predicted protein (453 aa)
   
  0.830
EDP02004
Predicted protein (493 aa)
   
  0.816
EDP01442
Predicted protein (451 aa)
   
  0.816
EDO97026
Aminotransferase-like protein (355 aa)
   
  0.816
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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