STRINGSTRING
EDO96747 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96747" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96747Predicted protein (125 aa)    
Predicted Functional Partners:
EDP01981
Predicted protein (110 aa)
     
        0.682
EDP00497
Predicted protein (100 aa)
     
        0.655
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
        0.627
WWP1
WW domain protein (746 aa)
     
        0.520
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
        0.513
EDP05108
Predicted protein (408 aa)
     
        0.508
EDP08357
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (396 aa)
     
        0.503
EDP04295
Predicted protein (83 aa)
     
        0.429
CSN2
COP9 signalosome subunit (437 aa)
     
        0.423
SRP72
Subunit of the signal recognition particle (746 aa)
     
        0.418
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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