STRINGSTRING
SET4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SET4" - Histone methyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET4Histone methyltransferase (2983 aa)    
Predicted Functional Partners:
EDP03152
Predicted protein (419 aa)
     
  0.972
EDO98875
Predicted protein (329 aa)
     
  0.971
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.965
MUT11
Transcriptional repression protein (370 aa)
     
  0.965
EDP01544
MYST family histone acetyltransferase (415 aa)
     
  0.965
EDP08877
Histone acetyltransferase (279 aa)
     
  0.964
EDP07222
Hypothetical protein (1678 aa)
     
  0.944
EDP02091
Predicted protein (111 aa)
     
  0.944
TEF20
Notchless-like protein (290 aa)
     
  0.942
EDP02957
Predicted protein (298 aa)
     
  0.942
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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