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EDO96781 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96781" - SWI/SNF chromatin remodeling complex component in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96781SWI/SNF chromatin remodeling complex component (962 aa)    
Predicted Functional Partners:
EDP05450
Global transcription factor (325 aa)
       
  0.972
DRT2
DRAP1-like protein (174 aa)
       
 
  0.892
DRT1
DR1-like protein (134 aa)
       
 
  0.891
EDP00173
chromodomain-helicase-DNA-binding protein (2000 aa)
     
0.879
EDP07530
Predicted protein (565 aa)
     
 
    0.873
ESP1
Separase, cell cycle protease (2337 aa)
     
 
    0.854
EDO99484
SNF2 superfamily protein (797 aa)
     
0.833
POLA1
DNA polymerase alpha subunit one (1114 aa)
     
  0.830
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
     
  0.825
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
  0.817
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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