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EDO96788 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96788" - SIN3 component of histone deacetylase complex in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96788SIN3 component of histone deacetylase complex (542 aa)    
Predicted Functional Partners:
EDP02188
Histone deacetylase (419 aa)
     
  0.975
EDP01149
Histone deacetylase (418 aa)
     
  0.973
EDO98539
Histone deacetylase (339 aa)
     
  0.971
EDO96250
Histone deacetylase (273 aa)
     
  0.970
EDO98779
MRG family protein (207 aa)
       
  0.968
EDO97987
Predicted protein (738 aa)
     
 
  0.964
EDP00599
Nucleosome remodeling factor (418 aa)
       
  0.934
EDP04619
Predicted protein (274 aa)
       
 
  0.891
EDP07560
Histone deacetylase (384 aa)
     
  0.885
EDP01653
Histone deacetylase (177 aa)
     
  0.885
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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