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AGT2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AGT2" - Alanine-glyoxylate transaminase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGT2Alanine-glyoxylate transaminase (488 aa)    
Predicted Functional Partners:
EDP05401
Aldehyde dehydrogenase (536 aa)
   
  0.973
AGT1
Alanine-glyoxylate transaminase (422 aa)
   
 
  0.943
SGA1a
Serine glyoxylate aminotransferase (448 aa)
   
 
  0.943
EDP01280
Methylmalonate semi-aldehyde dehydrogenase (553 aa)
   
 
  0.932
SHMT3
Serine hydroxymethyltransferase 3; Interconversion of serine and glycine (487 aa)
       
  0.915
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine (520 aa)
       
  0.915
SHMT2
Serine hydroxymethyltransferase 2; Interconversion of serine and glycine (472 aa)
       
  0.915
EDP09706
Beta-ureidopropionase (393 aa)
   
 
  0.913
EDO98866
Predicted protein (476 aa)
   
  0.909
ADH1
Dual function alcohol dehydrogenase / acetaldehyde dehydrogenase (954 aa)
   
  0.909
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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