STRINGSTRING
EDO96830 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96830" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96830Predicted protein (160 aa)    
Predicted Functional Partners:
LCI30
low-CO2-inducible protein (260 aa)
     
  0.999
NGB2
Nucleolar GTP-binding protein (189 aa)
     
 
  0.998
NGB1
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (691 aa)
     
 
  0.998
EDP01097
Predicted protein (181 aa)
     
 
  0.996
NHP2
Nucleolar protein, small subunit of H/ACA snoRNPs (162 aa)
   
  0.996
RPL13
Ribosomal protein L13 (218 aa)
     
  0.995
EDP08560
Predicted protein (223 aa)
     
  0.995
RPL15
Ribosomal protein L15 (204 aa)
     
  0.995
RPL18a
Ribosomal protein L18a (182 aa)
     
  0.992
RPS6
Ribosomal protein S6 (248 aa)
   
  0.988
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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