STRINGSTRING
EDO96870 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96870" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96870Predicted protein (125 aa)    
Predicted Functional Partners:
EDP00721
Predicted protein (123 aa)
   
 
  0.686
RPL36a
Ribosomal protein L36a (99 aa)
   
        0.488
CYN18-2
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (157 aa)
     
        0.449
MGO1
Mago nashi-like protein (148 aa)
     
        0.447
EDP05423
Predicted protein (125 aa)
     
        0.441
LSM1
Sm protein LSm1 (126 aa)
     
        0.428
PYR5
Uridine 5’-monophosphate synthase (474 aa)
       
      0.422
EDP06312
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (145 aa)
       
      0.422
RPL31
Ribosomal protein L31 (116 aa)
   
        0.406
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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