STRINGSTRING
EDO96893 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96893" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96893Predicted protein (320 aa)    
Predicted Functional Partners:
EDP04948
Predicted protein (559 aa)
     
        0.650
LCA1
Lecithin-cholesterol acyltransferase (856 aa)
       
 
  0.583
EDP05252
Predicted protein (712 aa)
     
 
  0.537
EDP05457
Predicted protein (155 aa)
       
 
  0.521
CDO2
Cysteine dioxygenase (287 aa)
     
        0.516
EDP02420
Predicted protein (323 aa)
     
        0.505
EDP04893
Predicted protein (440 aa)
       
 
  0.482
EDP02698
Predicted protein (201 aa)
     
        0.480
EDP00062
Hypothetical protein (268 aa)
     
        0.479
EDP09821
Predicted protein (102 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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