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EDO96909 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96909" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96909Predicted protein (364 aa)    
Predicted Functional Partners:
TRM5
tRNA-(N1G37) methyltransferase (400 aa)
     
   
  0.601
EDP06493
Predicted protein (341 aa)
     
 
  0.600
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
 
  0.599
EDP07168
Predicted protein (231 aa)
     
 
  0.582
TRM7
tRNA-2’-O-ribose methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (323 aa)
     
   
  0.577
TRM8
tRNA (guanine-7)-methyltransferase (246 aa)
     
 
  0.541
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
   
  0.540
EDO99394
Predicted protein (268 aa)
     
 
  0.500
EDP04418
tRNA methyltransferase (268 aa)
     
 
  0.488
MRPS15
Mitochondrial ribosomal protein S15 (273 aa)
     
      0.486
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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