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MTR4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MTR4" - DEAD-box family ATP dependent helicase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTR4DEAD-box family ATP dependent helicase (945 aa)    
Predicted Functional Partners:
EDP01505
Predicted protein (299 aa)
     
  0.980
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
 
  0.976
RNPH1
3’-5’ exoribonuclease PH component of the exosome (245 aa)
     
  0.976
RRP40
3’-5’ exonuclease component of the exosome (231 aa)
     
  0.968
XRN1
Single-stranded RNA 5’->3’ exonuclease (171 aa)
     
 
  0.952
EDP02918
Nucleolar protein (1380 aa)
     
 
  0.945
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
  0.938
EDO97979
Predicted protein (626 aa)
     
 
  0.938
EDP05821
Predicted protein (924 aa)
     
    0.933
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
 
  0.933
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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