STRINGSTRING
ANK13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ANK13" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK13Predicted protein (232 aa)    
Predicted Functional Partners:
RPT1
26S proteasome regulatory subunit (427 aa)
     
  0.986
RPT2
26S proteasome regulatory subunit (443 aa)
     
  0.986
RPN9
26S proteasome regulatory subunit (402 aa)
     
  0.984
UBCH1p
Ubiquitin carboxyl-terminal hydrolase (331 aa)
     
    0.984
RPN3
26S proteasome regulatory subunit (488 aa)
     
  0.982
RPT5
26S proteasome regulatory subunit (428 aa)
     
  0.982
EDO98571
Predicted protein (226 aa)
     
  0.981
RPT6
26S proteasome regulatory subunit (294 aa)
     
  0.981
RPN10
26S proteasome regulatory subunit (245 aa)
     
  0.980
RPN12
26S proteasome regulatory subunit (267 aa)
     
  0.980
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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