STRINGSTRING
EDO96998 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO96998" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO96998Predicted protein (193 aa)    
Predicted Functional Partners:
EDP03165
Predicted protein (330 aa)
     
        0.673
EDP07224
Predicted protein (286 aa)
     
        0.672
EDP04107
Predicted protein (309 aa)
     
        0.651
RNP3
Small nucleolar ribonucleoprotein U3 component (182 aa)
     
        0.650
EDO96851
Predicted protein (126 aa)
     
        0.647
EDP00663
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (179 aa)
     
        0.646
EDP01097
Predicted protein (181 aa)
     
        0.615
EDP03531
DEAD box RNA helicase (407 aa)
     
        0.579
EDP07846
Predicted protein (286 aa)
     
        0.517
EDP07231
Predicted protein (440 aa)
     
        0.516
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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