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MCA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MCA1" - Maturation/stability factor for petA mRNA in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1Maturation/stability factor for petA mRNA (1068 aa)    
Predicted Functional Partners:
CAH1
Carbonic anhydrase (377 aa)
           
  0.708
TCA1
Translation factor for chloroplast petA RNA (1103 aa)
           
  0.630
CCP1
low-CO2-inducible chloroplast envelope protein (358 aa)
           
  0.579
CCP2
low-CO2-inducible chloroplast envelope protein (355 aa)
           
  0.576
EDP09402
Predicted protein (711 aa)
           
  0.574
EDP01950
Predicted protein (831 aa)
           
  0.574
EDP00441
Predicted protein (837 aa)
           
  0.574
petD
Cytochrome b6/f subunit IV; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (160 aa)
       
 
  0.567
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (215 aa)
       
 
  0.499
GEF1
Voltage gated chloride channel (1426 aa)
           
  0.499
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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