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PGM4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PGM4" - Phosphoglycerate mutase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGM4Phosphoglycerate mutase (467 aa)    
Predicted Functional Partners:
PGH1
Enolase (477 aa)
   
 
  0.956
PGK1
Phosphoglycerate kinase (462 aa)
   
 
  0.954
GAPN1
Glyceraldehyde 3-phosphate dehydrogenase, nonphosphorylating (499 aa)
     
 
  0.939
GLYK
Glycerate kinase (351 aa)
     
 
    0.931
TPIC
Triose phosphate isomerase (282 aa)
   
 
  0.916
PGD1
D-3-phosphoglycerate dehydrogenase (587 aa)
   
 
  0.912
EDP04023
Predicted protein (383 aa)
   
 
  0.912
EDP03907
Predicted protein (391 aa)
   
 
  0.912
EDP08963
Predicted protein (733 aa)
         
    0.900
PGM5
Phosphoglycerate mutase (228 aa)
   
 
  0.875
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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