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SRP19 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SRP19" - Subunit of the signal recognition particle in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP19Subunit of the signal recognition particle (143 aa)    
Predicted Functional Partners:
SRP72
Subunit of the signal recognition particle (746 aa)
     
  0.990
SRP68
Subunit of the signal recognition particle (699 aa)
     
  0.990
SRP14
Subunit of the signal recognition particle (98 aa)
     
  0.987
SRP54
Subunit of the signal recognition particle (503 aa)
     
  0.981
EDP00260
Chloroplast SRP54 subunit of signal recognition particle (549 aa)
     
  0.980
SRP9
Subunit of the signal recognition particle (110 aa)
     
 
  0.831
EDP00399
RNA binding protein (434 aa)
     
      0.828
RPS8
Ribosomal protein S8 (208 aa)
   
 
    0.711
UBQ2
Bi-ubiquitin (153 aa)
     
 
  0.594
LCI30
low-CO2-inducible protein (260 aa)
   
 
    0.593
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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