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ARL2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ARL2" - ARF-like GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL2ARF-like GTPase (184 aa)    
Predicted Functional Partners:
POC7
Centriole proteome protein (183 aa)
       
 
  0.922
SMC3
Structural maintenance of chromosomes protein 3 (1121 aa)
     
   
  0.807
PDE6
3’,5’-cyclic-nucleotide phosphodiesterase (297 aa)
           
  0.801
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
   
  0.794
RAB23
Small rab-related GTPase (256 aa)
           
  0.723
EDP03211
Predicted protein (743 aa)
       
 
  0.517
VPS9
Guanine nucleotide exchange factor (495 aa)
           
  0.499
EDP03399
Predicted protein (478 aa)
       
 
  0.490
EDO97357
Predicted protein (316 aa)
       
 
  0.490
RPE1
Ribulose phosphate-3-epimerase, chloroplast precursor (265 aa)
     
   
  0.484
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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