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PRFC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRFC1" - Peptide-chain release factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRFC1Peptide-chain release factor (515 aa)    
Predicted Functional Partners:
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
     
   
  0.505
GUA1
GMP synthetase (535 aa)
   
   
  0.489
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
           
  0.485
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
       
 
  0.472
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
   
  0.464
EDO99099
Predicted protein (507 aa)
         
  0.459
EDP06926
Predicted protein (796 aa)
   
   
  0.455
EDP06649
Predicted protein (353 aa)
   
   
  0.455
EDP06262
Predicted protein (1097 aa)
     
   
  0.420
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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