STRINGSTRING
DXS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DXS1" - 1-deoxy-D-xylulose 5-phosphate synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXS11-deoxy-D-xylulose 5-phosphate synthase (708 aa)    
Predicted Functional Partners:
DXR1
1-deoxy-D-xylulose 5-phosphate reductoisomerase (415 aa)
 
 
  0.992
FPPS
Farnesyl diphosphate synthase (360 aa)
   
   
  0.795
HDS1
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (681 aa)
 
   
  0.790
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
 
   
  0.734
PSY
Phytoene synthase (382 aa)
   
   
  0.717
EDP05431
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (207 aa)
 
   
  0.687
EDO99516
Carotenoid isomerase (568 aa)
   
   
  0.679
IDS1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (465 aa)
 
   
  0.649
EDP05515
Geranyl diphosphate synthase (410 aa)
   
   
  0.643
LCYE
Lycopene epsilon cyclase (583 aa)
     
   
  0.628
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]