STRINGSTRING
MMP7 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MMP7" - Metalloproteinase of VMP family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP7Metalloproteinase of VMP family (674 aa)    
Predicted Functional Partners:
EDP05138
Predicted protein (228 aa)
     
        0.720
EDO99231
Predicted protein (155 aa)
     
        0.720
EDP09621
Predicted protein (125 aa)
     
        0.717
EDO95921
Predicted protein (257 aa)
     
        0.711
EDP04857
Predicted protein (197 aa)
     
        0.706
EDP04858
Predicted protein (389 aa)
     
        0.702
SAG1
Plus agglutinin protein (559 aa)
     
        0.694
EDP07354
Predicted protein (112 aa)
     
        0.692
EDP00826
Predicted protein (376 aa)
     
        0.691
MTA2
Hydroxyproline-rich glycoprotein (386 aa)
     
        0.680
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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