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RDP1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RDP1" - Rhodanese domain phosphatase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDP1Rhodanese domain phosphatase (116 aa)    
Predicted Functional Partners:
VIG1
Vasa intronic gene (361 aa)
           
  0.711
TWI1
Twister-like protein (120 aa)
           
  0.480
DCL2
Dicer-like protein (5684 aa)
           
  0.472
POLD1
DNA polymerase delta subunit one (1091 aa)
           
  0.468
CYCM1
Cyclin (473 aa)
           
  0.468
CYCC1
C-type cyclin (216 aa)
           
  0.468
CDKC1
Cyclin dependent kinase (487 aa)
           
  0.468
CYCD1
D-type cyclin (421 aa)
           
  0.468
CYCU1
U-type cyclin (111 aa)
           
  0.468
EDP09657
Histone methyltransferase (765 aa)
           
  0.467
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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