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UBC10 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBC10" - Ubiquitin-conjugating enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC10Ubiquitin-conjugating enzyme (163 aa)    
Predicted Functional Partners:
EDP03833
Predicted protein (612 aa)
     
 
  0.958
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
  0.944
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
     
  0.924
UBQ4
Ubiquitin (242 aa)
     
  0.919
SKP1
E3 ubiquitin ligase (157 aa)
     
  0.904
UBC2
Ubiquitin-conjugating enzyme E2 (139 aa)
     
  0.885
RBX1
Ring-box protein (130 aa)
     
  0.877
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
       
  0.876
CUL3
Cullin (744 aa)
     
  0.871
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.869
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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