STRINGSTRING
EDO97317 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97317" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97317Predicted protein (623 aa)    
Predicted Functional Partners:
EDP08645
cytosine-C5 specific DNA methyltransferase (1263 aa)
     
   
  0.738
EDP00917
Predicted protein (114 aa)
     
        0.707
DMT1
cytosine-C5 specific DNA methyltransferase (1333 aa)
     
        0.701
EDP05064
Riboflavin kinase (421 aa)
   
   
  0.679
EDP01816
NAD(P)-dependent steroid dehydrogenase (437 aa)
   
   
  0.678
PRF1
Pyruvate-ferredoxin oxidoreductase (1181 aa)
     
 
  0.677
EDP05725
Predicted protein (98 aa)
     
        0.677
EDP00826
Predicted protein (376 aa)
     
        0.677
EDP00356
Predicted protein (65 aa)
     
        0.676
RWP11
RWP-RK transcription factor (1781 aa)
     
        0.674
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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