STRINGSTRING
PP1A protein (Chlamydomonas reinhardtii) - STRING interaction network
"PP1A" - Protein phosphatase 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1AProtein phosphatase 1 (304 aa)    
Predicted Functional Partners:
EDP02031
Predicted protein (199 aa)
       
    0.972
EDP08753
Predicted protein (279 aa)
     
    0.957
EDP08752
Predicted protein (366 aa)
     
    0.957
EDP08387
Predicted protein (517 aa)
     
  0.951
EDO97006
Subunit of mRNA cleavage and polyadenylation specificity factor (690 aa)
     
    0.949
EDP05541
Predicted protein (389 aa)
     
    0.948
MKP5
MAP kinase phosphatase 5 (468 aa)
       
 
  0.944
EDP03048
Predicted protein (264 aa)
       
 
  0.924
PIN4
Peptidyl-prolyl cis-trans isomerase, parvulin-type (255 aa)
     
 
  0.920
PAP1
Poly(a) polymerase (407 aa)
     
      0.880
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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