STRINGSTRING
NIS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NIS1" - Nicastrin in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIS1Nicastrin (783 aa)    
Predicted Functional Partners:
PEN2
Presenilin enhancer 2 (126 aa)
       
  0.995
APH1
Gamma-secretase accessory subunit (240 aa)
     
  0.985
PSN1
Presenilin protease; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors (577 aa)
     
  0.984
MAPKKK11
Mitogen activated protein kinase kinase kinase 11 (415 aa)
       
  0.873
RPS29
Ribosomal protein S29 (56 aa)
           
  0.803
TATA
TatA-like sec-independent protein translocator subunit (114 aa)
           
  0.712
EDP01841
Sin3 complex component (136 aa)
       
      0.626
EDP04565
Predicted protein (447 aa)
     
    0.497
MIND1
Chloroplast septum site-determining protein (351 aa)
           
  0.495
EDP02215
Predicted protein (325 aa)
     
    0.486
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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