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SHMT2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SHMT2" - Serine hydroxymethyltransferase 2 in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHMT2Serine hydroxymethyltransferase 2; Interconversion of serine and glycine (472 aa)    
Predicted Functional Partners:
GCSP
Glycine cleavage system, P protein (1039 aa)
   
 
  0.995
EDP03434
Aminoimidazolecarboximide ribonucleotide transformylase (425 aa)
   
  0.988
GCST
Glycine cleavage system, T protein; The glycine cleavage system catalyzes the degradation of glycine (409 aa)
 
  0.984
EDO98078
Predicted protein; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (478 aa)
   
 
  0.983
SGA1a
Serine glyoxylate aminotransferase (448 aa)
   
 
  0.981
METH1
Cobalamin-dependent methionine synthase (1242 aa)
   
 
  0.979
GCSH
Glycine cleavage system, H-protein (159 aa)
   
 
  0.977
METH2
Cobalamin-dependent methionine synthase (1297 aa)
   
 
  0.977
EDP06255
5,10-methylenetetrahydrofolate reductase (594 aa)
   
 
  0.968
DLD2
Dihydrolipoamide dehydrogenase (574 aa)
   
 
  0.966
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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