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CYN23a protein (Chlamydomonas reinhardtii) - STRING interaction network
"CYN23a" - Cyclophilin-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYN23aCyclophilin-like protein (235 aa)    
Predicted Functional Partners:
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.828
EDP09509
Predicted protein (494 aa)
     
  0.778
RAN1
Ran-like small GTPase; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (223 aa)
     
  0.767
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
       
  0.753
EDP05779
Predicted protein (150 aa)
     
  0.749
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
    0.732
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.708
SMP3
Small nuclear ribonucleoprotein E (87 aa)
     
  0.682
EDP01120
Ubiquitin-like protein (94 aa)
     
  0.659
POLQ1
DNA polymerase theta (2508 aa)
     
  0.655
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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