STRINGSTRING
EDO97376 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97376" - DNA repair glycosylase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97376DNA repair glycosylase (292 aa)    
Predicted Functional Partners:
EDP06127
Predicted protein (437 aa)
 
 
  0.971
EDP03477
Predicted protein (264 aa)
     
  0.925
EDP03468
Predicted protein (1192 aa)
     
  0.850
EDP04921
Predicted protein (633 aa)
     
 
  0.768
EDP05037
Predicted protein (410 aa)
       
 
  0.763
EDP06926
Predicted protein (796 aa)
         
  0.747
EDP02076
Predicted protein (242 aa)
       
 
  0.743
EDP06305
Predicted protein (119 aa)
   
 
  0.666
HIS2
Histidinol phosphate phosphatase (188 aa)
       
 
  0.637
FEN1
Nuclease, Rad2 family; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as [...] (396 aa)
   
 
  0.620
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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