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RAA2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RAA2" - Pseudouridine synthase-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAA2Pseudouridine synthase-related protein (410 aa)    
Predicted Functional Partners:
RAA3
psaA mRNA maturation factor 3 (1783 aa)
           
  0.779
RAT2
Chloroplast tscA maturation factor (567 aa)
           
  0.580
RAT1
Chloroplast tscA maturation factor (245 aa)
           
  0.580
EDO96499
Peptidyl-trna hydrolase (116 aa)
           
  0.579
PUS4
tRNA pseudouridine synthase (287 aa)
           
  0.575
SPL7
Splicing factor (647 aa)
           
  0.575
PUS2
tRNA pseudouridine synthase (239 aa)
           
  0.575
EDP00143
Predicted protein (446 aa)
           
  0.575
PUS1
tRNA pseudouridine synthase (382 aa)
           
  0.575
TBC2
Translation factor for chloroplast psbC mRNA (1115 aa)
           
  0.572
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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