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SHY1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SHY1" - Cytochrome c oxidase assembly protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHY1Cytochrome c oxidase assembly protein (388 aa)    
Predicted Functional Partners:
COX15
Cytochrome c oxidase assembly factor (339 aa)
   
 
  0.978
COX11
Cytochrome c oxidase assembly protein (314 aa)
   
 
  0.930
COX10
Cytochrome c oxidase assembly protein (276 aa)
   
 
  0.775
ATP11
Assembly factor 1 for F1 component of mitochondrial ATP synthase (206 aa)
           
  0.748
MPPA2
Mitochondrial processing peptidase alpha subunit (485 aa)
     
 
  0.731
QCR1
Ubiquinol-cytochrome c oxidoreductase 50 kDa core 1 subunit (495 aa)
     
 
  0.731
EDP00605
Predicted protein (435 aa)
     
 
  0.731
CPE1
Chloroplast processing enzyme (1272 aa)
     
 
  0.731
MPPA1
Mitochondrial processing peptidase alpha subunit (507 aa)
     
 
  0.731
CPL5
Peptidase M16 family protein (272 aa)
     
 
  0.731
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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