STRINGSTRING
EDO97468 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97468" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97468Predicted protein (400 aa)    
Predicted Functional Partners:
RRP46
Exosome complex exonuclease (242 aa)
     
        0.648
EDP03298
mRNA cleavage and polyadenylation factor complex II subunit (423 aa)
     
        0.517
EDP05271
RNA processing protein (511 aa)
     
        0.502
EDP01555
Predicted protein (662 aa)
     
        0.502
EDP04475
Predicted protein (617 aa)
     
        0.500
EDO97882
Predicted protein (428 aa)
     
        0.500
EDP09423
Histone methyltransferase (569 aa)
     
        0.479
EDP05831
Predicted protein (156 aa)
     
        0.478
RPB12
Subunit f DNA-directed RNA polymerase (58 aa)
     
        0.478
EDO99339
WD40 repeat protein (339 aa)
     
        0.478
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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