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EDO97487 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97487" - Carbohydrate transporter in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97487Carbohydrate transporter (432 aa)    
Predicted Functional Partners:
EDO96468
RNA helicase, activating signal cointegrator 1 (2169 aa)
     
        0.643
EDP00240
Protein phosphatase 2A regulatory subunit (593 aa)
     
        0.589
MAP1A
Methionine aminopeptidase (383 aa)
           
  0.571
MAP1D
Methionine aminopeptidase (337 aa)
           
  0.571
NUOS1
NADH-ubiquinone oxidoreductase 76 kDa subunit (733 aa)
     
        0.551
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
        0.520
UAP2
UDP-N-acetylglucosamine-pyrophosphorylase (831 aa)
     
      0.520
SYP1
Qa-SNARE Sso1/Syntaxin1, PM-type (311 aa)
     
 
    0.513
EDP08847
Predicted protein (1305 aa)
     
        0.509
EDO98539
Histone deacetylase (339 aa)
     
        0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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