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SUS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SUS1" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUS1Predicted protein; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking exp [...] (104 aa)    
Predicted Functional Partners:
EDO96320
Predicted protein (190 aa)
     
  0.960
EDP02014
Predicted protein (604 aa)
       
 
  0.884
DP1
DP1 transcription factor (646 aa)
     
   
  0.727
EDO99716
Predicted protein (154 aa)
     
  0.643
EDP06932
ATM/ATR-like kinase (4723 aa)
       
  0.615
EDP03495
Predicted protein (121 aa)
         
  0.590
STA11
4-alpha-glucanotransferase (584 aa)
           
  0.576
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
         
  0.568
EDO97231
Predicted protein (142 aa)
         
  0.568
EDP04069
Predicted protein (74 aa)
     
 
  0.545
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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