STRINGSTRING
LCI33 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCI33" - low-CO2-inducible protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCI33low-CO2-inducible protein (886 aa)    
Predicted Functional Partners:
EDP00357
Predicted protein (143 aa)
     
        0.720
EDP00355
Predicted protein (138 aa)
     
        0.720
EDP01218
Predicted protein (181 aa)
     
        0.716
EDP00356
Predicted protein (65 aa)
     
        0.714
CGL40
Predicted protein (146 aa)
     
        0.711
DRT2
DRAP1-like protein (174 aa)
     
        0.709
GTR12
Glycosyl transferase (3180 aa)
     
        0.702
EDP04666
ARF/Sar1-like GTPase (289 aa)
     
        0.699
EDO97652
Predicted protein (533 aa)
     
        0.695
PUS4
tRNA pseudouridine synthase (287 aa)
     
        0.691
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (4%) [HD]