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DPE1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DPE1" - 4-alpha-glucanotransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPE14-alpha-glucanotransferase (941 aa)    
Predicted Functional Partners:
ISA3
Isoamylase, starch debranching enzyme (725 aa)
   
 
  0.915
AMYB3
Beta-amylase (399 aa)
         
  0.905
AMYB1
Beta-amylase (594 aa)
         
  0.905
AMYB2
Beta-amylase (395 aa)
         
    0.900
AGL1
Alpha glucosidase (1059 aa)
   
 
  0.879
STA11
4-alpha-glucanotransferase (584 aa)
   
 
0.865
PHOB
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1010 aa)
   
 
  0.841
PHOA
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (872 aa)
   
 
  0.821
AMYA2
Alpha-amylase (413 aa)
   
 
  0.814
PUL1
Pullulanase-type starch debranching enzyme (868 aa)
   
 
  0.799
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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