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PSY protein (Chlamydomonas reinhardtii) - STRING interaction network
"PSY" - Phytoene synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSYPhytoene synthase (382 aa)    
Predicted Functional Partners:
PDS1
Phytoene desaturase (564 aa)
 
  0.998
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
   
  0.967
FPPS
Farnesyl diphosphate synthase (360 aa)
   
  0.964
EDO99516
Carotenoid isomerase (568 aa)
 
 
  0.929
EDP08684
Solanesyl diphosphate synthase (394 aa)
   
  0.922
ERG26
C-3 sterol dehydrogenase/C-4 decarboxylase (465 aa)
     
 
  0.894
EDP01816
NAD(P)-dependent steroid dehydrogenase (437 aa)
     
 
  0.894
BHSD1
Steroid dehydrogenase (401 aa)
     
 
  0.894
EDO99225
Predicted protein (369 aa)
     
 
  0.894
EDP07691
Predicted protein (286 aa)
   
 
  0.871
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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