STRINGSTRING
EDO97736 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97736" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97736Predicted protein (865 aa)    
Predicted Functional Partners:
EDP03322
Predicted protein (811 aa)
     
  0.969
EDO99010
Predicted protein (80 aa)
     
  0.958
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.951
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.946
EDP06779
U2 snRNP auxiliary factor, large subunit (309 aa)
     
0.939
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
     
0.936
WWP1
WW domain protein (746 aa)
     
  0.913
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.906
SPL2
Splicing factor 3a, subunit 2 (287 aa)
     
  0.905
EDO96956
Predicted protein (632 aa)
     
  0.903
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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