STRINGSTRING
EDO97765 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97765" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97765Predicted protein (641 aa)    
Predicted Functional Partners:
PEX19
Pex19-like protein (363 aa)
     
  0.831
RECA
Chloroplast RecA recombination protein (415 aa)
       
      0.808
EDP04478
RecA-like protein (238 aa)
       
      0.808
RAD51
DNA recombination protein (343 aa)
       
      0.808
LSM5
Sm-E protein (95 aa)
       
 
  0.684
EDP05282
Predicted protein (538 aa)
     
 
  0.676
SMP6A
U6 small ribonucleoprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (89 aa)
       
 
  0.673
EDP08946
Predicted protein (516 aa)
     
 
  0.657
EDP05222
Predicted protein (172 aa)
     
 
  0.657
EDP05022
Long-chain-fatty-acid CoA ligase (555 aa)
     
 
  0.657
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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