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BBS1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"BBS1" - Bardet-biedl syndrome 1 protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS1Bardet-biedl syndrome 1 protein (611 aa)    
Predicted Functional Partners:
BBS7
Bardet-biedl syndrome 7 protein (676 aa)
     
  0.983
BBS9
Bardet-biedl syndrome 9 protein (302 aa)
     
  0.974
BBS8
TRP protein for ciliary function (530 aa)
     
  0.958
BBS5
Bardet-biedl syndrome 5 protein (352 aa)
     
  0.945
BBS4
Bardet biedl syndrome 4 protein (407 aa)
     
  0.938
BBS3B
ARF-like small GTPase (180 aa)
     
  0.921
IFT88
Intraflagellar transport particle protein 88 (782 aa)
     
   
  0.846
EDP08339
Predicted protein (133 aa)
     
  0.808
EDP08340
Predicted protein (182 aa)
     
  0.802
IFT172
Intraflagellar transport protein 172; Required for the maintenance and formation of cilia and participates in the control of flagellar assembly/disassembly at the tip. Involved in regulating the transition between anterograde and retrograde intraflagellar transport at the tip (1755 aa)
     
   
  0.732
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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