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EDO97889 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97889" - Hypothetical protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97889Hypothetical protein (539 aa)    
Predicted Functional Partners:
VPS18
Subunit of the VPS-C complex (1029 aa)
     
        0.479
EDP04144
Predicted protein (1362 aa)
     
        0.476
EDP08907
Predicted protein (235 aa)
     
        0.475
EDP06172
Predicted protein (325 aa)
     
        0.475
EDP01936
Predicted protein (384 aa)
     
        0.475
EDP00042
Predicted protein (801 aa)
     
        0.475
EDO99560
Predicted protein (288 aa)
     
        0.475
VPS39
Subunit of VPS-C complex (812 aa)
     
        0.427
EDP05717
Predicted protein (894 aa)
     
        0.426
EDO96419
Predicted protein (189 aa)
     
        0.422
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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