STRINGSTRING
EDO97905 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97905" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97905Predicted protein (634 aa)    
Predicted Functional Partners:
EDP06764
Predicted protein (261 aa)
     
 
  0.984
EDP05135
SNF2 superfamily protein (1610 aa)
     
 
  0.837
RPN1
26S proteasome regulatory subunit (895 aa)
     
      0.835
EDO97089
Predicted protein (245 aa)
       
      0.822
UBQ4
Ubiquitin (242 aa)
     
  0.745
UBQ6
Ubiquitin fusion protein (805 aa)
     
  0.742
EDP06657
Predicted protein (629 aa)
     
 
  0.733
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.733
UBQ2
Bi-ubiquitin (153 aa)
       
  0.733
UBQ1a
Bi-ubiquitin, major isoform (153 aa)
       
  0.733
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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