STRINGSTRING
EDO97912 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97912" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97912Predicted protein (315 aa)    
Predicted Functional Partners:
EDP05135
SNF2 superfamily protein (1610 aa)
   
  0.873
EDO99686
Kinesin-like calmodulin binding protein (1158 aa)
     
  0.839
PP1A
Protein phosphatase 1 (304 aa)
     
 
  0.804
STPK11
Serine/threonine protein kinase 11 (363 aa)
     
  0.796
EDP04529
Predicted protein (258 aa)
     
  0.796
EDP08691
Predicted protein (233 aa)
     
  0.793
CAF1
CCR4-associated factor (300 aa)
     
  0.777
NOT1
Component of CCR4-NOT transcriptional regulator complex (1440 aa)
     
  0.772
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.771
SMPF
Small nuclear riboprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (85 aa)
       
    0.767
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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