STRINGSTRING
EDO97916 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97916" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97916Predicted protein (237 aa)    
Predicted Functional Partners:
CUL2
Cullin (782 aa)
     
 
  0.714
CSN2
COP9 signalosome subunit (437 aa)
       
 
  0.628
EDO99259
Predicted protein (314 aa)
       
 
  0.627
EDP04611
Predicted protein (188 aa)
       
      0.626
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
        0.543
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
 
  0.482
EDP01689
Predicted protein (399 aa)
     
        0.480
EDP04629
Predicted protein (364 aa)
     
        0.480
VPS11
Subunit of VPS-C complex (1102 aa)
     
        0.479
APG6
Autophagy protein (495 aa)
     
        0.477
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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