STRINGSTRING
EDO97933 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO97933" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO97933Predicted protein (972 aa)    
Predicted Functional Partners:
EDO96983
Predicted protein (1018 aa)
     
        0.716
EDO97932
Predicted protein (326 aa)
     
        0.663
NOL1
NO synthase-like protein (733 aa)
     
        0.655
EDP07902
Predicted protein (1905 aa)
     
        0.652
EDP08272
Predicted protein (794 aa)
     
        0.613
EDP08920
Predicted protein (523 aa)
     
        0.590
EDP07462
Predicted protein (940 aa)
     
        0.578
TRM2B
tRNA (uracil-5)-methyltransferase (206 aa)
     
        0.566
RET1
Predicted protein (1029 aa)
     
        0.560
EDP06485
RNA binding rRNA processing protein (1280 aa)
     
        0.554
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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